PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10031655
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family ERF
Protein Properties Length: 184aa    MW: 19420.8 Da    PI: 4.9692
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10031655genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.61e-152875355
          AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 y+GVr +  +g+Wv+eIr+p++   + r++lg++ t+e+Aa+a+  a+ +l+g
  Lus10031655 28 YRGVRIR--SGKWVSEIREPKK---TSRIWLGTYPTPEMAAAAYNVAAIALKG 75
                 9***965..5*********854...5**********************99987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541715.1E-182685IPR016177DNA-binding domain
PROSITE profilePS5103219.5462783IPR001471AP2/ERF domain
SMARTSM003802.8E-262789IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.8E-252784IPR001471AP2/ERF domain
CDDcd000188.55E-172885No hitNo description
PfamPF008471.5E-82875IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MAANKPDPPP PPQPTQPPPP SSSTPSMYRG VRIRSGKWVS EIREPKKTSR IWLGTYPTPE  60
MAAAAYNVAA IALKGRETPL NFPASIGSYP TPASTSASDI RAAAHTAAAA FVAPKSAHGQ  120
ASGEGSMRNP EEYMDVEDIL DMPNLLVEMA GGMMVSPPRM GDTASYGDSP DNSEGESLWS  180
YDK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002304466.18e-53AP2 domain-containing family protein
RefseqXP_010278525.11e-52PREDICTED: ethylene-responsive transcription factor ERF026-like
SwissprotQ9CAN93e-43ERF26_ARATH; Ethylene-responsive transcription factor ERF026
TrEMBLB9GW619e-53B9GW61_POPTR; AP2 domain-containing family protein
TrEMBLA0A0D2T7082e-52A0A0D2T708_G
STRINGPOPTR_0003s12120.13e-52(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12630.11e-38ERF family protein